NET TRAPPER: README

This is a demo of a Processing application for simultaneous network visualization and feature analysis.  This application is linked to only a single data set for testing and demonstration purposes only.

to run:
(1) download file
(2) unzip in a directory of your choice
(3) open terminal and change to the directory that contains the application directory
(4) run the following command

application.macosx/combined_applets_02_29_2012/Contents/MacOS/JavaApplicationStub

(5) Press 'esc' key to terminate application

to use:
start in parallel coordinate plot window.  

hover over any axis to display the value for the that network feature. the network feature is appears over the top of the axis.  This demo includes the following feature axes:
1 - model index
2 - model predicted synergy (simulation result)
3 - overall error (fitness to data)
4 - NoNE = number of network edges
5 - NoN = number of nodes
6 - GD = greatest distance between any two nodes
7 - NoDP_x_y = number of direct paths between nodes x and y.