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getBackgroundRadius() - Method in class AnaMorf.UserInterface
 
getBranches() - Method in class AnaMorf.SkeletonPruner
 
getBranchpoints() - Method in class AnaMorf.HyphalAnalyser
 
getBWOutput() - Method in class AnaMorf.HyphalAnalyser
 
getColorOutput() - Method in class AnaMorf.HyphalAnalyser
 
getCurvatureWindow() - Method in class AnaMorf.UserInterface
 
getFilterRadius() - Method in class AnaMorf.UserInterface
 
getHGU() - Method in class AnaMorf.HyphalAnalyser
 
getImageFormat() - Method in class AnaMorf.UserInterface
Returns the image format (file extension) specified by the user.
getImageRes2() - Method in class AnaMorf.UserInterface
 
getLength() - Method in class AnaMorf.HyphalAnalyser
 
getManualThreshold() - Method in class AnaMorf.UserInterface
Returns the manual grey-level threshold specified by the user if the 'Manual' radio button was selected or -1 otherwise.
getMaskImage() - Method in class AnaMorf.Batch_Analyser
 
getMaxCirc() - Method in class AnaMorf.UserInterface
Returns the maximum circularity specified by the user.
getMinArea() - Method in class AnaMorf.UserInterface
Returns the minimum projected area specified by the user.
getMinLength() - Method in class AnaMorf.UserInterface
Returns the minimum branch length specified by the user.
getOptions() - Method in class AnaMorf.UserInterface
 
getPolygonRoi(int, int[], int[]) - Method in class AnaMorf.Batch_Analyser
Constructs a PolygonRoi object from a set of input coordinates.
getPrunedImage() - Method in class AnaMorf.SkeletonPruner
 
getRes() - Method in class AnaMorf.UserInterface
Returns the image resolution specified by the user.
getThresholdMethod() - Method in class AnaMorf.UserInterface
 
getTips() - Method in class AnaMorf.HyphalAnalyser
 
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