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searchImage(ImageProcessor, boolean, Roi) - Method in class AnaMorf.Batch_Analyser
Searches the image (represented by currentImage) for objects, traces the outline of each object using Wand .autoOutline() and sends each detected boundary to analyseImage() for morphological analysis.
searchNeighbourhood(int, int, int, int) - Method in class AnaMorf.HyphalAnalyser
 
setOutputData(int) - Method in class AnaMorf.Batch_Analyser
 
showGUI() - Method in class AnaMorf.Batch_Analyser
Displays a dialog to obtain input parameters from a user.
SkeletonPruner - Class in AnaMorf
SkeletonPruner takes as argument a ByteProcessor, containing a binary skeleton object.
SkeletonPruner(int, ByteProcessor, Rectangle, boolean, boolean) - Constructor for class AnaMorf.SkeletonPruner
 
summarise() - Method in class AnaMorf.ResultSummariser
Summarises the data in ImageJ's results table according to the column headings specified in BatchAnalyser.
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