- searchImage(ImageProcessor, boolean, Roi) - Method in class AnaMorf.Batch_Analyser
-
Searches the image (represented by currentImage
) for
objects, traces the outline of each object using Wand
.autoOutline()
and sends each detected boundary to
analyseImage()
for morphological analysis.
- searchNeighbourhood(int, int, int, int) - Method in class AnaMorf.HyphalAnalyser
-
- setOutputData(int) - Method in class AnaMorf.Batch_Analyser
-
- showGUI() - Method in class AnaMorf.Batch_Analyser
-
Displays a dialog to obtain input parameters from a user.
- SkeletonPruner - Class in AnaMorf
-
SkeletonPruner takes as argument a ByteProcessor, containing a binary
skeleton object.
- SkeletonPruner(int, ByteProcessor, Rectangle, boolean, boolean) - Constructor for class AnaMorf.SkeletonPruner
-
- summarise() - Method in class AnaMorf.ResultSummariser
-
Summarises the data in ImageJ's results table according to the column
headings specified in BatchAnalyser.