InstallationΒΆ
biorpy requires the following packages to be installed:
- rpy2 <http://rpy.sourceforge.net/rpy2/doc-2.3/html/> (which requires R)
- numpy <http://www.numpy.org/>
- pandas <http://pandas.pydata.org/>
Installation of biorpy itself can be accomplished as for most typical python packages:
python setup.py install
Additional standard options are documented here <https://docs.python.org/2/install/>.
An excellent place to start (and which will also serve to test you installation) is to run the examples.py script file included with the distribution. The output is by default placed in a pdf in the current working directory.